Transcript: LINC02158:11

Basic information

LNCipedia transcript ID: LINC02158:11 
LNCipedia gene ID: LINC02158
Location (hg38): chr3:42770612-42773634
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 896 bp
Exons: 2
Sources: Refseq - Dec 2014
Alternative transcript names: NR_122070
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.365 non-coding 
CPAT coding probability 3.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02158:11 no no no no

Available literature

  1. Lin (2016), Primate-specific oestrogen-responsive long non-coding RNAs regulate proliferation and viability of human breast cancer cells., Open Biol


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCBP2-1:2
4.0 lnc-CCBP2-3:2
4.1 lnc-CCBP2-3:2
5.0 lnc-CCBP2-3:2
5.1 LINC02158:5
5.2 LINC02158:11