Transcript: LINC02158:12

Basic information

LNCipedia transcript ID: LINC02158:12 
LNCipedia gene ID: LINC02158
Location (hg38): chr3:42772813-42773793
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 828 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225611.1|FTMT21100003061.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -50.9674 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02158:12 no no no no

Available literature

  1. Lin (2016), Primate-specific oestrogen-responsive long non-coding RNAs regulate proliferation and viability of human breast cancer cells., Open Biol


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CCBP2-3:5
5.0 lnc-CCBP2-3:5
5.1 LINC02158:6
5.2 LINC02158:12