Transcript: LINC02166:6

Basic information

LNCipedia transcript ID: LINC02166:6 
HGNC Gene Symbol: LINC02166    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2166
Ensembl Gene ID: ENSG00000260259
Ensembl Transcript ID: ENST00000567544
Location (hg38): chr16:89682620-89686569
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 721 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000567544.1
Alternative gene names: ENSG00000260259.1; RP11-368I7.4; LINC02166


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 62.287 coding 
CPAT coding probability 28.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02166:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-368I7.4.1-1:3
4.1 lnc-RP11-368I7.4.1-1:3
5.0 lnc-RP11-368I7.4.1-1:3
5.1 LINC02166:3
5.2 LINC02166:6