Transcript: LINC02167:7

Basic information

LNCipedia transcript ID: LINC02167:7 
HGNC Gene Symbol: LINC02167    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2167
Ensembl Gene ID: ENSG00000261122
Ensembl Transcript ID: ENST00000566900
Location (hg38): chr16:35746552-35756515
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1489 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000566900.1; RP11-352B15.1-001; OTTHUMT00000431393.1; ENST00000566900.5
Alternative gene names: ENSG00000261122.1; RP11-352B15.1; OTTHUMG00000176021.1; ENSG00000261122.2; 5S_rRNA; ENSG00000261122.6; FLJ26245; LINC02167


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 53.4606 non-coding 
CPAT coding probability 7.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02167:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTD-2144E22.5.1-9:2
4.0 lnc-CTD-2144E22.5.1-9:2
4.1 lnc-CTD-2144E22.5.1-9:2
5.0 lnc-CTD-2144E22.5.1-9:2
5.1 LINC02167:3
5.2 LINC02167:7