Transcript: LINC02177:24

Basic information

LNCipedia transcript ID: LINC02177:24 
LNCipedia gene ID: LINC02177
Ensembl Gene ID: ENSG00000260071
Ensembl Transcript ID: ENST00000570038
Location (hg38): chr16:9466655-9517564
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 796 bp
Exons: 6
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000570038.1; RP11-418I22.2-001; OTTHUMT00000435115.1; NONHSAT140464
Alternative gene names: ENSG00000260071.1; RP11-418I22.2; OTTHUMG00000177058.1; AC007221.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -129.7173 non-coding 
CPAT coding probability 0.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02177:24 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C16orf72-4:1
4.0 lnc-C16orf72-4:1
4.1 lnc-C16orf72-4:1
5.0 lnc-C16orf72-4:1
5.1 LINC02177:11
5.2 LINC02177:24