Transcript: LINC02177:25

Basic information

LNCipedia transcript ID: LINC02177:25 
LNCipedia gene ID: LINC02177
Location (hg38): chr16:9501779-9517515
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 422 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024325; NONHSAT140465
Alternative gene names: XLOC_011639; linc-ATF7IP2-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -225.9805 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02177:25 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C16orf72-2:1
3.1 lnc-C16orf72-4:2
4.0 lnc-C16orf72-4:2
4.1 lnc-C16orf72-4:2
5.0 lnc-C16orf72-4:2
5.1 LINC02177:12
5.2 LINC02177:25