Transcript: LINC02177:27

Basic information

LNCipedia transcript ID: LINC02177:27 
LNCipedia gene ID: LINC02177
Ensembl Gene ID: ENSG00000283003
Ensembl Transcript ID: ENST00000634367
Location (hg38): chr16:9542045-9614894
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 948 bp
Exons: 5
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000634367.1
Alternative gene names: ENSG00000283003.1; RP11-418I22.3; AC007221.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -122.508 non-coding 
CPAT coding probability 8.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02177:27 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C16orf72-19:1
4.1 lnc-C16orf72-4:13
5.0 lnc-C16orf72-4:13
5.1 LINC02177:14
5.2 LINC02177:27