Transcript: LINC02188:16

Basic information

LNCipedia transcript ID: LINC02188:16 
LNCipedia gene ID: LINC02188
Location (hg38): chr16:86739858-86741447
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1375 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024499; NONHSAT144245
Alternative gene names: XLOC_011816; linc-MAP1LC3B-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.7456 non-coding 
CPAT coding probability 6.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02188:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FOXL1-2:4
3.1 lnc-FOXL1-3:6
4.0 lnc-FOXL1-3:6
4.1 lnc-FOXL1-3:6
5.0 lnc-FOXL1-3:6
5.1 LINC02188:9
5.2 LINC02188:16