Transcript: LINC02195:3

Basic information

LNCipedia transcript ID: LINC02195:3 
HGNC Gene Symbol: LINC02195    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2195
Ensembl Gene ID: ENSG00000236481
Ensembl Transcript ID: ENST00000443373
Location (hg38): chr16:26584755-26594813
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 294 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000443373; ENST00000443373.1; AC002331.1-001; OTTHUMT00000133457.1; NONHSAT141423
Alternative gene names: ENSG00000236481; AC002331.1; ENSG00000236481.1; OTTHUMG00000060136.1; LINC02195


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -138.8334 non-coding 
CPAT coding probability 2.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02195:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NSMCE1-1:1
3.1 lnc-NSMCE1-4:1
4.0 lnc-NSMCE1-4:1
4.1 lnc-NSMCE1-4:1
5.0 lnc-NSMCE1-4:1
5.1 LINC02195:2
5.2 LINC02195:3