Transcript: LINC02199:11

Basic information

LNCipedia transcript ID: LINC02199:11 
LNCipedia gene ID: LINC02199
Location (hg38): chr5:8839765-8881520
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1003 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00009235
Alternative gene names: XLOC_004286; linc-CCT5-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.3113 non-coding 
CPAT coding probability 0.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02199:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MTRR-5:3
3.1 lnc-MTRR-5:4
4.0 lnc-MTRR-5:4
4.1 lnc-MTRR-5:4
5.0 lnc-MTRR-5:4
5.1 LINC02199:6
5.2 LINC02199:11