Transcript: LINC02202:23

Basic information

LNCipedia transcript ID: LINC02202:23 
LNCipedia gene ID: LINC02202
Location (hg38): chr5:159100513-159102504
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 521 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000245812.2|HBMT00001154066.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -228.1179 non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02202:23 no no no no

Available literature

  1. Joung (2017), Genome-scale activation screen identifies a lncRNA locus regulating a gene neighbourhood., Nature


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-UBLCP1-5:11
5.0 lnc-UBLCP1-5:11
5.1 LINC02202:9
5.2 LINC02202:23