Transcript: LINC02211:10

Basic information

LNCipedia transcript ID: LINC02211:10 
HGNC Gene Symbol: LINC02211    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2211
Ensembl Gene ID: ENSG00000245662
Ensembl Transcript ID: ENST00000502100
Location (hg38): chr5:25190682-25306172
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 937 bp
Exons: 5
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00009373; ENST00000502100; ENST00000502100.2; RP11-184E9.1-001; OTTHUMT00000366522.1; NONHSAT100768
Alternative gene names: XLOC_004321; linc-CDH6-7; ENSG00000245662; RP11-184E9.1; ENSG00000245662.2; OTTHUMG00000161960.1; ENSG00000245662.3; LINC02211


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.814 non-coding 
CPAT coding probability 0.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02211:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C5orf17-5:2
3.1 lnc-C5orf17-6:2
4.0 lnc-C5orf17-6:2
4.1 lnc-C5orf17-6:2
5.0 lnc-C5orf17-6:2
5.1 LINC02211:5
5.2 LINC02211:10