Transcript: LINC02219:9

Basic information

LNCipedia transcript ID: LINC02219:9 
LNCipedia gene ID: LINC02219
Location (hg38): chr5:68187940-68198401
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 461 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00009985; NONHSAT101831
Alternative gene names: XLOC_004412; linc-PIK3R1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -22.8298 non-coding 
CPAT coding probability 0.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02219:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-404L6.2.1-1:2
3.1 lnc-PIK3R1-1:2
4.0 lnc-RP11-404L6.2.1-1:11
4.1 lnc-RP11-404L6.2.1-1:11
5.0 lnc-RP11-404L6.2.1-1:11
5.1 LINC02219:3
5.2 LINC02219:9