Transcript: LINC02223:10

Basic information

LNCipedia transcript ID: LINC02223:10 
LNCipedia gene ID: LINC02223
Location (hg38): chr5:17684584-17955857
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 823 bp
Exons: 7
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT100665; FPKM1_group_25019_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -26.4421 non-coding 
CPAT coding probability 2.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02223:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BASP1-7:4
4.0 lnc-BASP1-7:4
4.1 lnc-BASP1-7:4
5.0 lnc-BASP1-7:4
5.1 LINC02223:3
5.2 LINC02223:10