Transcript: LINC02240:20

Basic information

LNCipedia transcript ID: LINC02240:20 
LNCipedia gene ID: LINC02240
RefSeq ID: NR_109882
Location (hg38): chr5:125036831-125367734
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 608 bp
Exons: 6
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109882; NR_109882.1
Alternative gene names: LOC101927421


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -127.114 non-coding 
CPAT coding probability 1.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02240:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-43D2.2.1-12:2
4.0 lnc-RP11-43D2.2.1-12:2
4.1 lnc-RP11-43D2.2.1-12:2
5.0 lnc-RP11-43D2.2.1-12:2
5.1 LINC02240:11
5.2 LINC02240:20