Transcript: LINC02240:22

Basic information

LNCipedia transcript ID: LINC02240:22 
HGNC Gene Symbol: LINC02240    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2240
Ensembl Gene ID: ENSG00000260192
Ensembl Transcript ID: ENST00000625219
Location (hg38): chr5:125325350-125367734
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 233 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000625219.1
Alternative gene names: ENSG00000281608.1; RP11-395P13.7; AC109471.3; ENSG00000260192.2; LINC02240


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -307.2526 non-coding 
CPAT coding probability 1.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02240:22 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-43D2.2.1-12:3
4.1 lnc-RP11-43D2.2.1-12:3
5.0 lnc-RP11-43D2.2.1-12:3
5.1 LINC02240:13
5.2 LINC02240:22