Transcript: LINC02262:4

Basic information

LNCipedia transcript ID: LINC02262:4 
HGNC Gene Symbol: LINC02262    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2262
Ensembl Gene ID: ENSG00000224932
Ensembl Transcript ID: ENST00000416680
Location (hg38): chr4:117314597-117360639
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 735 bp
Exons: 7
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00007817; ENST00000416680; ENST00000416680.1; AC107399.2-001; OTTHUMT00000132196.2; NONHSAT097950
Alternative gene names: XLOC_004051; linc-TRAM1L1; ENSG00000224932; AC107399.2; ENSG00000224932.1; OTTHUMG00000059449.2; LINC02262


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.2341 non-coding 
CPAT coding probability 8.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02262:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TRAM1L1-1:1
3.1 lnc-TRAM1L1-1:1
4.0 lnc-TRAM1L1-1:1
4.1 lnc-TRAM1L1-1:1
5.0 lnc-TRAM1L1-1:1
5.1 LINC02262:2
5.2 LINC02262:4