Transcript: LINC02264:5

Basic information

LNCipedia transcript ID: LINC02264:5 
LNCipedia gene ID: LINC02264
Location (hg38): chr4:117869257-117869924
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 490 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008206; NONHSAT097966
Alternative gene names: XLOC_003660; linc-NDST3-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -180.3955 non-coding 
CPAT coding probability 1.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02264:5 no no no no

Available literature

  1. Tian (2017), Differentially Expressed lncRNAs in Gastric Cancer Patients: A Potential Biomarker for Gastric Cancer Prognosis., J Cancer


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NDST3-2:2
3.1 lnc-NDST3-2:2
4.0 lnc-NDST3-2:2
4.1 lnc-NDST3-2:2
5.0 lnc-NDST3-2:2
5.1 LINC02264:3
5.2 LINC02264:5