Transcript: LINC02268:9

Basic information

LNCipedia transcript ID: LINC02268:9 
HGNC Gene Symbol: LINC02268    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2268
Ensembl Gene ID: ENSG00000248174
Ensembl Transcript ID: ENST00000515444
RefSeq ID: NR_125896
Location (hg38): chr4:174094660-174220398
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1328 bp
Exons: 5
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000515444; ENST00000515444.1; RP11-148L24.1-001; OTTHUMT00000362083.1; NONHSAT099311; NR_125896; ENST00000515444.5; NR_125896.1
Alternative gene names: ENSG00000248174; RP11-148L24.1; ENSG00000248174.1; OTTHUMG00000160745.2; ENSG00000248174.5; LINC02268; LOC101928509


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.5972 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02268:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FBXO8-4:1
3.1 lnc-FBXO8-4:1
4.0 lnc-FBXO8-4:1
4.1 lnc-FBXO8-4:1
5.0 lnc-FBXO8-4:1
5.1 LINC02268:2
5.2 LINC02268:9