Transcript: LINC02269:9

Basic information

LNCipedia transcript ID: LINC02269:9 
HGNC Gene Symbol: LINC02269    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2269
Ensembl Gene ID: ENSG00000250708
Ensembl Transcript ID: ENST00000512263
Location (hg38): chr4:173897273-173929525
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 499 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000512263; ENST00000512263.1; RP11-161D15.1-001; OTTHUMT00000362021.1; NONHSAT099306
Alternative gene names: ENSG00000250708; RP11-161D15.1; ENSG00000250708.1; OTTHUMG00000160736.1; LINC02269


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -189.1177 non-coding 
CPAT coding probability 30.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02269:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CEP44-4:2
3.1 lnc-CEP44-4:2
4.0 lnc-CEP44-4:2
4.1 lnc-CEP44-4:2
5.0 lnc-CEP44-4:2
5.1 LINC02269:5
5.2 LINC02269:9