Transcript: LINC02270:8

Basic information

LNCipedia transcript ID: LINC02270:8 
HGNC Gene Symbol: LINC02270    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2270
Ensembl Gene ID: ENSG00000251210
Ensembl Transcript ID: ENST00000505386
Location (hg38): chr4:12223482-12251286
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 610 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000505386; ENST00000505386.1; RP11-168E17.1-001; OTTHUMT00000359107.1; NONHSAT095556
Alternative gene names: ENSG00000251210; RP11-168E17.1; ENSG00000251210.1; OTTHUMG00000160074.2; ENSG00000251210.5; LINC02270


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -336.6305 non-coding 
CPAT coding probability 1.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02270:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DRD5-10:2
3.1 lnc-DRD5-12:2
4.0 lnc-DRD5-12:2
4.1 lnc-DRD5-12:2
5.0 lnc-DRD5-12:2
5.1 LINC02270:5
5.2 LINC02270:8