Transcript: LINC02274:3

Basic information

LNCipedia transcript ID: LINC02274:3 
HGNC Gene Symbol: LINC02274    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2274
Ensembl Gene ID: ENSG00000258586
Ensembl Transcript ID: ENST00000555539
RefSeq ID: NR_135238
Location (hg38): chr14:73822559-73830135
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1174 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00022375; ENST00000555539; ENST00000555539.1; RP5-1021I20.2-001; OTTHUMT00000412573.1; NONHSAT037748; NR_135238.1
Alternative gene names: XLOC_011072; linc-C14orf43-2; ENSG00000258586; RP5-1021I20.2; ENSG00000258586.1; OTTHUMG00000171254.1; LINC02274; LOC100506498


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.5049 non-coding 
CPAT coding probability 1.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02274:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C14orf43-1:1
3.1 lnc-C14orf43-1:1
4.0 lnc-C14orf43-1:1
4.1 lnc-C14orf43-1:1
5.0 lnc-C14orf43-1:1
5.1 LINC02274:2
5.2 LINC02274:3