Transcript: LINC02287:3

Basic information

LNCipedia transcript ID: LINC02287:3 
HGNC Gene Symbol: LINC02287    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2287
Ensembl Gene ID: ENSG00000258499
Ensembl Transcript ID: ENST00000555299
RefSeq ID: NR_135253
Location (hg38): chr14:92905697-92907482
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1384 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000555299; ENST00000555299.1; RP11-862G15.2-001; OTTHUMT00000412410.1; NONHSAT039339; NR_135253.1
Alternative gene names: ENSG00000258499; RP11-862G15.2; ENSG00000258499.1; OTTHUMG00000171224.1; LINC02287; LOC101929002


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -92.5095 non-coding 
CPAT coding probability 4.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02287:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ITPK1-1:1
3.1 lnc-ITPK1-1:1
4.0 lnc-ITPK1-1:1
4.1 lnc-ITPK1-1:1
5.0 lnc-ITPK1-1:1
5.1 LINC02287:2
5.2 LINC02287:3