Transcript: LINC02296:4

Basic information

LNCipedia transcript ID: LINC02296:4 
HGNC Gene Symbol: LINC02296    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2296
Ensembl Gene ID: ENSG00000258859
Ensembl Transcript ID: ENST00000557070
Location (hg38): chr14:87353070-87573022
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 544 bp
Exons: 7
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000557070; ENST00000557070.1; RP11-594C13.1-001; OTTHUMT00000413102.1; NONHSAT038154
Alternative gene names: ENSG00000258859; RP11-594C13.1; ENSG00000258859.1; OTTHUMG00000171354.1; LINC02296


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -142.188 non-coding 
CPAT coding probability 9.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02296:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GALC-4:1
3.1 lnc-GALC-5:1
4.0 lnc-GALC-5:1
4.1 lnc-GALC-5:1
5.0 lnc-GALC-5:1
5.1 LINC02296:2
5.2 LINC02296:4