Transcript: LINC02301:24

Basic information

LNCipedia transcript ID: LINC02301:24 
HGNC Gene Symbol: LINC02301    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2301
Ensembl Gene ID: ENSG00000258743
Ensembl Transcript ID: ENST00000555150
Location (hg38): chr14:82642632-82706825
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 428 bp
Exons: 6
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000555150; ENST00000555150.1; RP11-406A9.2-001; OTTHUMT00000413240.1; NONHSAT038087; ENST00000555150.5
Alternative gene names: ENSG00000258743; RP11-406A9.2; ENSG00000258743.1; OTTHUMG00000171387.1; ENSG00000258743.5; LINC02301


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.6946 non-coding 
CPAT coding probability 2.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02301:24 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TSHR-5:4
3.1 lnc-TSHR-5:4
4.0 lnc-TSHR-5:4
4.1 lnc-TSHR-5:4
5.0 lnc-TSHR-5:4
5.1 LINC02301:12
5.2 LINC02301:24