Transcript: LINC02308:4

Basic information

LNCipedia transcript ID: LINC02308:4 
HGNC Gene Symbol: LINC02308    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2308
Ensembl Gene ID: ENSG00000258675
Ensembl Transcript ID: ENST00000555001
RefSeq ID: NR_109999
Location (hg38): chr14:81441987-81450157
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 637 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000555001; ENST00000555001.1; RP11-299L17.3-001; OTTHUMT00000413323.1; NONHSAT038065; NR_109999; NR_109999.1
Alternative gene names: ENSG00000258675; RP11-299L17.3; ENSG00000258675.1; OTTHUMG00000171418.1; LINC02308; LOC100506700


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -85.5904 non-coding 
CPAT coding probability 30.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02308:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-STON2-1:1
3.1 lnc-STON2-1:1
4.0 lnc-STON2-1:1
4.1 lnc-STON2-1:1
5.0 lnc-STON2-1:1
5.1 LINC02308:2
5.2 LINC02308:4