Transcript: LINC02309:6

Basic information

LNCipedia transcript ID: LINC02309:6 
HGNC Gene Symbol: LINC02309    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2309
Ensembl Gene ID: ENSG00000258994
Ensembl Transcript ID: ENST00000553679
Location (hg38): chr14:86332376-86401285
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 207 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000553679; ENST00000553679.1; RP11-26L16.1-001; OTTHUMT00000413104.1; NONHSAT038141
Alternative gene names: ENSG00000258994; RP11-26L16.1; ENSG00000258994.1; OTTHUMG00000171356.1; LINC02309


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02309:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-322L20.1.1-7:2
3.1 lnc-RP11-322L20.1.1-7:2
4.0 lnc-RP11-322L20.1.1-7:2
4.1 lnc-RP11-322L20.1.1-7:2
5.0 lnc-RP11-322L20.1.1-7:2
5.1 LINC02309:3
5.2 LINC02309:6