Transcript: LINC02311:5

Basic information

LNCipedia transcript ID: LINC02311:5 
HGNC Gene Symbol: LINC02311    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2311
Ensembl Gene ID: ENSG00000258718
Ensembl Transcript ID: ENST00000556819
Location (hg38): chr14:81727780-81740272
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 477 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000556819; ENST00000556819.1; RP11-226P1.2-002; OTTHUMT00000413274.1; NONHSAT038073
Alternative gene names: ENSG00000258718; RP11-226P1.2; ENSG00000258718.1; OTTHUMG00000171400.1; LINC02311


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -189.3513 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02311:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SEL1L-2:2
3.1 lnc-SEL1L-2:2
4.0 lnc-SEL1L-2:2
4.1 lnc-SEL1L-2:2
5.0 lnc-SEL1L-2:2
5.1 LINC02311:3
5.2 LINC02311:5