Transcript: LINC02317:5

Basic information

LNCipedia transcript ID: LINC02317:5 
LNCipedia gene ID: LINC02317
Location (hg38): chr14:90453230-90456787
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2690 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022831; NONHSAT039222
Alternative gene names: XLOC_011102; linc-C14orf102-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.5071 non-coding 
CPAT coding probability 6.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02317:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TTC7B-3:1
3.1 lnc-TTC7B-4:1
4.0 lnc-TTC7B-4:1
4.1 lnc-TTC7B-4:1
5.0 lnc-TTC7B-4:1
5.1 LINC02317:2
5.2 LINC02317:5