Transcript: LINC02317:7

Basic information

LNCipedia transcript ID: LINC02317:7 
HGNC Gene Symbol: LINC02317    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2317
Ensembl Gene ID: ENSG00000258678
Ensembl Transcript ID: ENST00000555413
Location (hg38): chr14:90452063-90455117
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 426 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000555413; ENST00000555413.1; RP11-1078H9.1-001; OTTHUMT00000411362.1; NONHSAT039221
Alternative gene names: ENSG00000258678; RP11-1078H9.1; ENSG00000258678.1; OTTHUMG00000171046.1; LINC02317


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.1458 non-coding 
CPAT coding probability 2.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02317:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TTC7B-3:3
3.1 lnc-TTC7B-4:3
4.0 lnc-TTC7B-4:3
4.1 lnc-TTC7B-4:3
5.0 lnc-TTC7B-4:3
5.1 LINC02317:4
5.2 LINC02317:7