Transcript: LINC02320:25

Basic information

LNCipedia transcript ID: LINC02320:25 
LNCipedia gene ID: LINC02320
Ensembl Gene ID: ENSG00000258919
Ensembl Transcript ID: ENST00000553270
Location (hg38): chr14:101628984-101632530
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 539 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000553270.1; RP11-1029J19.4-001; OTTHUMT00000414792.1; NONHSAT040045
Alternative gene names: ENSG00000258919.1; RP11-1029J19.4; OTTHUMG00000171690.1; AL049836.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -112.0785 non-coding 
CPAT coding probability 2.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02320:25 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HSP90AA1-7:1
4.0 lnc-HSP90AA1-7:1
4.1 lnc-HSP90AA1-6:12
5.0 lnc-HSP90AA1-6:12
5.1 LINC02320:13
5.2 LINC02320:25