Transcript: LINC02336:5

Basic information

LNCipedia transcript ID: LINC02336:5 
HGNC Gene Symbol: LINC02336    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2336
Ensembl Gene ID: ENSG00000271395
Ensembl Transcript ID: ENST00000434117
Location (hg38): chr13:89551233-89552389
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 330 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000434117.2
Alternative gene names: ENSG00000271395.1; RP11-75N6.3; LINC02336


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -179.2557 non-coding 
CPAT coding probability 2.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02336:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPC5-4:2
4.0 lnc-GPC5-4:2
4.1 lnc-GPC5-4:2
5.0 lnc-GPC5-4:2
5.1 LINC02336:3
5.2 LINC02336:5