Transcript: LINC02345:20

Basic information

LNCipedia transcript ID: LINC02345:20 
LNCipedia gene ID: LINC02345
Location (hg38): chr15:37984725-38024970
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 486 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023353; NONHSAT041695
Alternative gene names: XLOC_011213; linc-SPRED1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.4442 non-coding 
CPAT coding probability 7.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02345:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMCO5A-1:3
3.1 lnc-TMCO5A-1:3
4.0 lnc-TMCO5A-1:3
4.1 lnc-TMCO5A-1:3
5.0 lnc-TMCO5A-1:3
5.1 LINC02345:4
5.2 LINC02345:20