Transcript: LINC02346:7

Basic information

LNCipedia transcript ID: LINC02346:7 
HGNC Gene Symbol: LINC02346    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2346
Ensembl Gene ID: ENSG00000206187
Ensembl Transcript ID: ENST00000557171
Location (hg38): chr15:25902433-25932752
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 518 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000557171; ENST00000557171.1; RP11-1084I9.1-002; OTTHUMT00000414885.1; NONHSAT041161
Alternative gene names: ENSG00000206187; RP11-1084I9.1; ENSG00000206187.3; OTTHUMG00000171719.1; LINC02346


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -98.2411 non-coding 
CPAT coding probability 2.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02346:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GABRA5-3:2
3.1 lnc-SNURF-6:2
4.0 lnc-GABRA5-10:2
4.1 lnc-GABRA5-10:2
5.0 lnc-GABRA5-10:2
5.1 LINC02346:3
5.2 LINC02346:7