Transcript: LINC02347:19

Basic information

LNCipedia transcript ID: LINC02347:19 
HGNC Gene Symbol: LINC02347    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2347
Ensembl Gene ID: ENSG00000214043
Ensembl Transcript ID: ENST00000545767
Location (hg38): chr12:126442526-126469806
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1563 bp
Exons: 10
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000545767; ENST00000545767.1; RP5-944M2.3-004; OTTHUMT00000399849.1; ENST00000545767.5
Alternative gene names: ENSG00000214043; RP5-944M2.3; ENSG00000214043.3; OTTHUMG00000168469.1; ENSG00000214043.7; LINC02347


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.6316 non-coding 
CPAT coding probability 37.45% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02347:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM132B-9:3
3.1 lnc-TMEM132B-9:4
4.0 lnc-TMEM132B-9:4
4.1 lnc-TMEM132B-9:4
5.0 lnc-TMEM132B-9:4
5.1 LINC02347:8
5.2 LINC02347:19