Transcript: LINC02347:21

Basic information

LNCipedia transcript ID: LINC02347:21 
LNCipedia gene ID: LINC02347
Location (hg38): chr12:126442966-126469806
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1500 bp
Exons: 9
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000540774; ENST00000540774.1; RP5-944M2.3-201
Alternative gene names: ENSG00000214043; RP5-944M2.3; ENSG00000214043.3; OTTHUMG00000168469.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.6316 non-coding 
CPAT coding probability 37.53% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02347:21 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM132B-9:5
3.1 lnc-TMEM132B-9:5
4.0 lnc-TMEM132B-9:5
4.1 lnc-TMEM132B-9:5
5.0 lnc-TMEM132B-9:5
5.1 LINC02347:10
5.2 LINC02347:21