Transcript: LINC02356:10

Basic information

LNCipedia transcript ID: LINC02356:10 
LNCipedia gene ID: LINC02356
Location (hg38): chr12:111369282-111397099
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 363 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000548006; ENST00000548006.1; RP3-473L9.4-001; OTTHUMT00000404775.1; NONHSAT030726
Alternative gene names: ENSG00000257595; RP3-473L9.4; ENSG00000257595.1; OTTHUMG00000169548.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -55.1438 non-coding 
CPAT coding probability 2.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02356:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SH2B3-1:1
3.1 lnc-SH2B3-1:1
4.0 lnc-SH2B3-1:1
4.1 lnc-SH2B3-1:1
5.0 lnc-SH2B3-1:1
5.1 LINC02356:4
5.2 LINC02356:10