Transcript: LINC02376:5

Basic information

LNCipedia transcript ID: LINC02376:5 
HGNC Gene Symbol: LINC02376    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2376
Ensembl Gene ID: ENSG00000256292
Ensembl Transcript ID: ENST00000536330
Location (hg38): chr12:127274467-127284283
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 724 bp
Exons: 4
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000536330; ENST00000536330.1; RP11-955H22.1-001; OTTHUMT00000399771.1; NONHSAT031861
Alternative gene names: ENSG00000256292; RP11-955H22.1; ENSG00000256292.1; OTTHUMG00000168443.1; LINC02376


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.9049 non-coding 
CPAT coding probability 0.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02376:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLC15A4-12:1
3.1 lnc-SLC15A4-12:1
4.0 lnc-SLC15A4-12:1
4.1 lnc-SLC15A4-12:1
5.0 lnc-SLC15A4-12:1
5.1 LINC02376:2
5.2 LINC02376:5