Transcript: LINC02380:8

Basic information

LNCipedia transcript ID: LINC02380:8 
LNCipedia gene ID: LINC02380
Location (hg38): chr4:57425913-57427649
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 582 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008087; NONHSAT096559
Alternative gene names: XLOC_003548; linc-LPHN3-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -201.5231 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02380:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POLR2B-2:2
3.1 lnc-POLR2B-2:2
4.0 lnc-POLR2B-2:2
4.1 lnc-POLR2B-2:2
5.0 lnc-POLR2B-2:2
5.1 LINC02380:4
5.2 LINC02380:8