Transcript: LINC02392:21

Basic information

LNCipedia transcript ID: LINC02392:21 
HGNC Gene Symbol: LINC02392    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2392
Ensembl Gene ID: ENSG00000258183
Ensembl Transcript ID: ENST00000548172
Location (hg38): chr12:90293323-90296247
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 537 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000548172; ENST00000548172.1; RP11-753N8.1-002; OTTHUMT00000407004.1; NONHSAT029842
Alternative gene names: ENSG00000258183; RP11-753N8.1; ENSG00000258183.1; OTTHUMG00000170044.1; ENSG00000258183.5; LINC02392


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.9808 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02392:21 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMTC3-6:3
3.1 lnc-TMTC3-7:3
4.0 lnc-TMTC3-7:3
4.1 lnc-TMTC3-7:3
5.0 lnc-TMTC3-7:3
5.1 LINC02392:11
5.2 LINC02392:21