Transcript: LINC02393:6

Basic information

LNCipedia transcript ID: LINC02393:6 
LNCipedia gene ID: LINC02393
RefSeq ID: NR_033987
Location (hg38): chr12:127881617-127898639
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2020 bp
Exons: 3
Sources: Broad Institute; NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00020163; NONHSAT031882; NR_033987; NR_033987.1
Alternative gene names: XLOC_009946; linc-TMEM132C-3; FLJ37505


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -88.7486 non-coding 
CPAT coding probability 15.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02393:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM132C-3:2
3.1 lnc-TMEM132C-3:1
4.0 lnc-TMEM132C-3:1
4.1 lnc-TMEM132C-3:1
5.0 lnc-TMEM132C-3:1
5.1 LINC02393:3
5.2 LINC02393:6