Transcript: LINC02397:25

Basic information

LNCipedia transcript ID: LINC02397:25 
HGNC Gene Symbol: LINC02397    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2397
Ensembl Gene ID: ENSG00000205056
Ensembl Transcript ID: ENST00000504409
Location (hg38): chr12:92466451-92492091
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 10626 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT029890; ENST00000504409.3
Alternative gene names: ENSG00000205056.8; RP11-693J15.5; LINC02397


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.1371 non-coding 
CPAT coding probability 1.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02397:25 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLLU1.1-1:10
4.0 lnc-CLLU1.1-1:10
4.1 lnc-CLLU1.1-1:10
5.0 lnc-CLLU1.1-1:10
5.1 LINC02397:10
5.2 LINC02397:25