Transcript: LINC02398:22

Basic information

LNCipedia transcript ID: LINC02398:22 
LNCipedia gene ID: LINC02398
Location (hg38): chr12:20009887-20011559
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 271 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020355; NONHSAT027219
Alternative gene names: XLOC_009685; linc-PDE3A-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.1682 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02398:22 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AEBP2-2:1
3.1 lnc-AEBP2-4:2
4.0 lnc-AEBP2-4:2
4.1 lnc-AEBP2-4:2
5.0 lnc-AEBP2-4:2
5.1 LINC02398:10
5.2 LINC02398:22