Transcript: LINC02398:25

Basic information

LNCipedia transcript ID: LINC02398:25 
LNCipedia gene ID: LINC02398
Location (hg38): chr12:20098362-20100498
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 794 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT027221; FPKM1_group_5884_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -241.6299 non-coding 
CPAT coding probability 1.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02398:25 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PDE3A-1:3
4.0 lnc-PDE3A-1:3
4.1 lnc-AEBP2-4:12
5.0 lnc-AEBP2-4:12
5.1 LINC02398:13
5.2 LINC02398:25