Transcript: LINC02404:4

Basic information

LNCipedia transcript ID: LINC02404:4 
LNCipedia gene ID: LINC02404
Location (hg38): chr12:91877391-91880408
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 941 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000546710; ENST00000546710.1; RP11-587P21.2-001; OTTHUMT00000407215.1
Alternative gene names: ENSG00000257893; RP11-587P21.2; ENSG00000257893.1; OTTHUMG00000170089.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -123.764 non-coding 
CPAT coding probability 8.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02404:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CLLU1.1-4:1
3.1 lnc-CLLU1.1-4:1
4.0 lnc-CLLU1.1-4:1
4.1 lnc-CLLU1.1-4:1
5.0 lnc-CLLU1.1-4:1
5.1 LINC02404:2
5.2 LINC02404:4