Transcript: LINC02407:17

Basic information

LNCipedia transcript ID: LINC02407:17 
LNCipedia gene ID: LINC02407
Location (hg38): chr12:76252275-76297735
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 966 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020476; NONHSAT029564
Alternative gene names: XLOC_009810; linc-ZDHHC17-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 29.033 non-coding 
CPAT coding probability 8.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02407:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZDHHC17-3:1
3.1 lnc-ZDHHC17-6:1
4.0 lnc-ZDHHC17-6:1
4.1 lnc-ZDHHC17-6:1
5.0 lnc-ZDHHC17-6:1
5.1 LINC02407:2
5.2 LINC02407:17