Transcript: LINC02407:21

Basic information

LNCipedia transcript ID: LINC02407:21 
LNCipedia gene ID: LINC02407
Location (hg38): chr12:76259838-76293891
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 378 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021167; NONHSAT029568
Alternative gene names: XLOC_009810; linc-ZDHHC17-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 10.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02407:21 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZDHHC17-3:4
3.1 lnc-ZDHHC17-6:4
4.0 lnc-ZDHHC17-6:4
4.1 lnc-ZDHHC17-6:4
5.0 lnc-ZDHHC17-6:4
5.1 LINC02407:6
5.2 LINC02407:21