Transcript: LINC02407:29

Basic information

LNCipedia transcript ID: LINC02407:29 
LNCipedia gene ID: LINC02407
Location (hg38): chr12:76293914-76305093
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 712 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020478; NONHSAT029572
Alternative gene names: XLOC_009810; linc-ZDHHC17-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.7603 non-coding 
CPAT coding probability 1.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02407:29 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZDHHC17-3:5
3.1 lnc-ZDHHC17-6:7
4.0 lnc-ZDHHC17-6:7
4.1 lnc-ZDHHC17-6:7
5.0 lnc-ZDHHC17-6:7
5.1 LINC02407:14
5.2 LINC02407:29