Transcript: LINC02413:12

Basic information

LNCipedia transcript ID: LINC02413:12 
LNCipedia gene ID: LINC02413
Location (hg38): chr12:93003127-93019820
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 898 bp
Exons: 4
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000552353; ENST00000552353.1; RP11-511B23.1-001; OTTHUMT00000407309.1; NONHSAT029905
Alternative gene names: ENSG00000257345; RP11-511B23.1; ENSG00000257345.1; OTTHUMG00000170111.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -163.7764 non-coding 
CPAT coding probability 38.40% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02413:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-511B23.3.1-3:1
3.1 lnc-RP11-511B23.3.1-3:1
4.0 lnc-RP11-511B23.3.1-3:1
4.1 lnc-RP11-511B23.3.1-3:1
5.0 lnc-RP11-511B23.3.1-3:1
5.1 LINC02413:5
5.2 LINC02413:12