Transcript: LINC02418:10

Basic information

LNCipedia transcript ID: LINC02418:10 
HGNC Gene Symbol: LINC02418    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2418
Ensembl Gene ID: ENSG00000214039
Ensembl Transcript ID: ENST00000567788
Location (hg38): chr12:130033454-130045057
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4592 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000567788.1; RP11-474D1.3-001; OTTHUMT00000399498.1; NONHSAT031947
Alternative gene names: ENSG00000214039.3; RP11-474D1.3; OTTHUMG00000168373.2; ENSG00000214039.4; ENSG00000214039.8; LINC02418


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 25.9807 non-coding 
CPAT coding probability 7.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02418:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM132D-1:1
4.0 lnc-TMEM132D-1:1
4.1 lnc-TMEM132D-1:1
5.0 lnc-TMEM132D-1:1
5.1 LINC02418:3
5.2 LINC02418:10